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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015917758.1_cds_XP_016467276.1_60035
CDS Infomation

[gene=LOC107789910] [db_xref=GeneID:107789910] [protein=histone deacetylase HDT1-like isoform X3] [protein_id=XP_016467276.1] [location=join(113467..113479,114335..114405,114514..114725,114917..114933,115014..115061,115171..115343,115526..115621,115750..115822,115937..116069,116161..116212)] [gbkey=CDS]
Sequence

ATGGAGTTTTGGGGTGTTGAAGTGAAAGCAGGAGAATCTCTAAAGGTCAGGCCAGAGCTT
TATAAGCTCATTCATATTTCCCAGGCAGCTTTAGGTGAAGTGAAGGATGCCAAAGAAGCC
AAAACTGTTCCACTACGCGTCACTGTCGGAGAAAATAACTATGTCATTGGAACTCTATCA
GCTGAAGAAAGACCTCAATTGATGTTTGATTTGGTTTTTGAAAAGGAGTTTGAGCTTTCA
CATGGCTGGAAAAATGGGAGTGTCTACTTCATTGGATACACAGCTGATGACCCAACTGAT
GAGATTGACTCTGAAGATGAAGATTCTGAGGATGAAGAAAATGTTTTAGCTGCTCTAAAT
GGAAATCTTGAGGAGAAAAAGGCCGATGTGAAGGATGTAAAGCCTGTGGCAAAAGAGGCT
GCACCTACTAAGGCAAAAGCTGCAGTAGCTGAACCTAAGAAGGCGGAGTCTGATGATGAT
GACGACGACGATTCTGATGATGAAGATGATAGTGACGAGGCAGAAGATGGCATGGATTCT
GATGGTCCAGAAGGAATGGATTTTTCTGATGATTCTGAGGATGATGATGATTCGGAGGAA
GATGAGTCAGAAGAAGAGACACCTAAAAAGAACAAGAGGCCTGCTCCACCTGCTAAAGCT
GGTTCTGCCAAAAAAGTAAAACAAGCTACACCCGACAAGTCAGGTGGCAAGAAAGGTCCA
GCAACACCTGCCTTTGCTAAGCAAAATGGTAAACCTGCAGCAGCCAACGGTAACAAGGGA
AAGGGTCAGAGTCCAAAATCCGGTGGCCAGTTCTCTGGCAAATCTCCCAACAACAGAAAC
TTCAGTGGCCAACAGAAAGGTTTCAAGGGTAAGCATGGGAAGAAGTAG

Peptide Sequence

PEP ID

XP_016467276.1
PEP Infomation

PREDICTED: histone deacetylase HDT1-like isoform X3 [Nicotiana tabacum]
Sequence

MEFWGVEVKAGESLKVRPELYKLIHISQAALGEVKDAKEAKTVPLRVTVGENNYVIGTLS
AEERPQLMFDLVFEKEFELSHGWKNGSVYFIGYTADDPTDEIDSEDEDSEDEENVLAALN
GNLEEKKADVKDVKPVAKEAAPTKAKAAVAEPKKAESDDDDDDDSDDEDDSDEAEDGMDS
DGPEGMDFSDDSEDDDDSEEDESEEETPKKNKRPAPPAKAGSAKKVKQATPDKSGGKKGP
ATPAFAKQNGKPAAANGNKGKGQSPKSGGQFSGKSPNNRNFSGQQKGFKGKHGKK

Transcript Sequence

Gene sequence data has not been registered.